Malaria

Identity by Descent: Tracing Malaria's Family Tree

The Genetic Fingerprint of Transmission Every time a malaria parasite reproduces, it creates an opportunity to trace ancestry. When two parasites share large segments of identical DNA, it’s not coincidence—it’s evidence of recent common inheritance. This is Identity by Descent (IBD), and it’s revolutionizing how we understand malaria transmission. Unlike traditional surveillance that tracks where people get infected, IBD tracks where parasites came from. This molecular genealogy reveals: Transmission chains — Which infections are connected?

The Complexities of Complexity of Infection: Understanding Multiple Malaria Strains

The Hidden Complexity Inside When a mosquito infected with malaria bites a person, we typically think of it as transmitting “malaria.” But the reality is far more complex. That single mosquito bite might be transmitting one parasite strain—or five, or ten distinct genetic clones simultaneously. Complexity of Infection (COI) is the number of genetically distinct malaria parasite clones present in a single infection. Understanding COI is crucial for: Transmission intensity assessment — High COI indicates high transmission Drug resistance monitoring — Polyclonal infections complicate resistance detection Vaccine evaluation — Multiple strains can confound efficacy estimates Elimination strategies — Low COI suggests transmission can be interrupted But measuring COI is surprisingly challenging.

Antimalarial Resistance in Ethiopia

Estimating the prevalence of antimalarial mutations in Ethiopia across time and space

`DISCent`: Spatial Inbreeding Estimation

An algorithm for detecting deme inbreeding spatial coefficients from recombining pathogen genetic data

Household Prevalence of Plasmodium falciparum, Plasmodium vivax, and Plasmodium ovale in the Democratic Republic of the Congo, 2013-2014

In a cross-sectional molecular study in the Democratic Republic of the Congo, 78% of households had ≥1 member infected with Plasmodium falciparum, Plasmodium vivax, and/or Plasmodium ovale spp.; 47% of children and 33% of adults tested positive for …

Vivax in the DRC

Determing who was being infected, where infections were occuring, and where they originated

The epidemiology of Plasmodium vivax among adults in the Democratic Republic of the Congo

Reports of P. vivax infections among Duffy-negative hosts have accumulated throughout sub-Saharan Africa. Despite this growing body of evidence, no nationally representative epidemiological surveys of P. vivax in sub-Saharan Africa have been …

The Burden of Malaria in the Democratic Republic of the Congo

Despite evidence that older children and adolescents bear the highest burden of malaria, large malaria surveys focus on younger children. We used polymerase chain reaction data from the 2013-2014 Demographic and Health Survey in the Democratic …

Under the Radar: Epidemiology of Plasmodium ovale in the Democratic Republic of the Congo

BACKGROUND: Plasmodium ovale is an understudied malaria species prevalent throughout much of sub-Saharan Africa. Little is known about the distribution of ovale malaria and risk factors for infection in areas of high malaria endemicity. METHODS: …

Selection of Cytochrome b Mutants Is Rare among Plasmodium falciparum Patients Failing Treatment with Atovaquone-Proguanil in Cambodia

Atovaquone-proguanil remains effective against multidrug-resistant Plasmodium falciparum in Southeast Asia, but resistance is mediated by a single point mutation in cytochrome b (cytb) that can arise during treatment. Among 14 atovaquone-proguanil …